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Lecture 3
Bio 451 Molecular Biology Techniques
Chromatography
Many notes taken from "Molecular Biomethods Handbook"
1998. Edited by Ralph Rapley and John M. Walker. Humana Press,
Totowa, NJ.
Brief History
The name derives from separation of plant pigments.
Early on, Egyptians used this technology
to separate dyes on papyrus.
In 1906, the Russian botanist Tswett created the name for chromatography.
In 1944, Martin and Synge developed the technique of partition
chromatography and received a Nobel Prize.
In 1960, Gel Chromatography was introduced.
General Principles of Chromatography
- Separation is achieved by distribution of particles between
a stationary phase and a mobile phase.
- A stationary phase may be a solid, liquid, or solid/liquid
mixture (where liquid is held stationary by a solid). The solid
support is called the matrix.
- The mobile phase is called the solvent and it is usually
a liquid, but may also be a gas.
- The compounds to be separated are considered the solute.
Examples of different stationary and mobile phases
- Gel filtration is used for molecular sieving using
a stationary porous bead through which a liquid mobile phase
move inside and inside the porous beads.
- Adsorption chromatography is where an adsorption equilibrium
is set up between a stationary solid and a mobile liquid phase.
- In paper chromatography or countercurrent distribution
(thin layer chromatography), the partition equilibrium is set
up between a stationary liquid (or semi-liquid) phase and a mobile
liquid phase.
- In Gas chromatography the partition equilibrium is
set up between a stationary liquid and a mobile gas phase.
- Ion Exchange chromatography is based on an ion exchange
equilibrium where the stationary phase is the ion exchange resin
and the mobile phase is a liquid electrolyte phase.
- Affinity Chromatography is an equilibrium between
a macromolecule and a small molecule for which it has high biological
specificity (and hence affinity).
Size-Exclusion Chromatography
It is also known as gel-filtration chromatography and
separates proteins and other biological macromolecules on the
basis of molecular size. This type of chromatography is compatible
with physiological conditions.
The solid-phase matrix consists of porous beads (100-250µm)
that are packed into a column with a mobile-liquid phase flowing
through the column. The mobile phase has access to both the volume
inside the pores and the volume external to the beads. The high
porosity typically leads to a total liquid volume of >95% of
the packed column.
During separation by this method, large molecules remain in
the volume external to the beads because they are unable to enter
the pores. The resulting shorter flow path means that they pass
through the column relatively rapidly, emerging early. Proteins
that are excluded from the pores completely elute in what is designated
the void volume, Vo. This is often determined experimentally
by the use of a high-molecular weight component, such a Blue Dextran
or calf thymus DNA. Small molecules that can access the liquid
within the pores of the beads are retained longer and therefore
pass more slowly through the column. The elution volume for material
included in the pores is designated the total volume, Vt.
This represents the total liquid volume of the column and is often
determined by small molecules, such as vitamin B12.
The elution volume for a given protein will lie between Vo
and Vt, and is designated the elution volume, Ve. A partition
coefficient can be determined for each protein as Kav:
Kav = (Ve-Vo)/(Vt-Vo)
In size exclusion, the macromolecules are not physically retained,
unlike adsorption techniques; therefore, the protein will elute
in a defined volume between Vo and Vt. If the protein
elutes before the void volume (Ve<Vo) this suggests
channeling through the column owing to improper packing or operation
of the column. If the protein elutes after the total volume (Ve>Vt),
then some interaction must have occurred between the matrix and
the protein of interest.
Size exclusion tends to be used at the end of a purification
scheme when impurities are low in number and the target protein
has been purified and concentrated by earlier chromatography steps.
An exception to this is membrane proteins, where gel filtration
may be used first because concentration techniques are not readily
used and the material will be progressively diluted during the
purification scheme.
Several parameters are important in size-exclusion chromatography.
- Pumps: An important factor in size exclusion is a
reproducible and accurate flow rate. The most commonly used pumps
are peristaltic pumps.
- Column: Resolution of molecular separation is dependent
on column length. Columns tend toward being long and thin, typically
70-100 cm long. In some instances, the length of the column required
to obtain a satisfactory separation exceed that which can be
packed into a commercially available column (>1 m). In these
cases, columns can be packed in series. The tubing connecting
the columns should be as narrow and as short as possible to avoid
zone spreading.
- Detectors: Protein elution is most often monitored
by absorbance in the ultraviolet range, either at 280 nm,
which is suitable for proteins with aromatic amino acids, or
at 206 nm, which detects the peptide bond. Fluorescence detection
either by direct detection of fluorescent tryptophan and tyrosine
residues or after chemical derivatization have been used, as
have refractive index, radiochemical, electrochemical, and molecular
size (by laser-light scattering).
- Fraction collectors: For the detector to reflect as
near as possible in real time the fraction collector, the volume
between the detector and the fraction collector should be minimal.
- Buffers: Size-exclusion matrices tend to be compatible
with most aqueous-buffer systems even in the presence of surfactants,
reducing agents, or denaturing agents. All buffers used in
size exclusion should ideally be filtered through a 0.2 µm
filter and degassed by low vacuum or sparging with an inert gas,
such as helium. The majority of protein separations performed
using size exclusion are carried out in the presence of aqueous-phase
buffers. Size exclusion of proteins in organic phases is not
normally undertaken but is sometimes used for membrane-protein
separations.
- Selection of matrix: In size exclusion chromatography,
the pore diameter controlling the separation is selected for
the relative size of proteins to be separated. The beads used
for size exclusion have a closely controlled pore size, with
a high chemical and physical stability. They are hydrophilic
and inert to minimize chemical interactions between the solutes
(proteins) and the matrix itself. Many matrices retain a residual
charge owing to, for example, sulfate groups in agarose or carboxyl
residues in dextran. The ionic strength of the buffer should
be kept at 0.15-2.0M to avoid electrostatic or Van Der Waals
interactions that can lead to non-ideal size exclusion.
Practical Procedures
- Flow rates: Conventional low-pressure size exclusion
matrices tend to operate at linear flow rates of 1-15 cm/h. Too
high a flow rate leads to incomplete partitioning and band spreading.
Conversely, very low flow rates may lead to diffusion and band
spreading.
- Separation of proteins: It is not only the molecular
weight that is important in size exclusion, but also the hydrodynamic
volume or the Stokes radius of the molecule. Globular proteins
appear to have a lower molecular size than proteins with a similar
molecular weight, which are in a a-helical form. Gel-filtration columns are often
loaded at relatively high concentrations of protein, such as
2-20 mg/ml.
- Column cleaning and storage: They can be cleaned in
situ or as loose gel in a sintered-glass funnel. Common general-cleaning
agents include nonionic detergents, such as Triton X-100, for
lipids and 0.2-0.5M NaOH for proteins. In extreme circumstances,
contaminating protein can be removed by use of enzymatic digestion
(pepsin for proteins and nucleases for RNA and DNA). The gel
should be stored in a buffer with antimicrobial activity, such
as 20% (v/v) ethanol or 0.02-0.05% (w/v) sodium azide.
Ion Exchange Chromatography
Ion-Exchange Chromatography
Proteins contain charged groups on their surfaces that enhance
their interaction with solvent and hence their solubility. At
physiological pH, some of these charged groups are cationic (positively
charged, e.g., lysine), whereas others are anionic (negatively
charged, e.g., aspartate). Because proteins differ from each other
in their amino-acid sequence, the net charge possessed by a protein
at physiological pH is determined ultimately by the balance between
these charges (i.e. negatively charged proteins possess more negatively
charged groups than positively charged groups). This also underlies
the different isoelectric points (pIs) of proteins. Ion-exchange
chromatography separates proteins first on the basis of their
charge type (cationic or anionic) and, second, on the basis of
relative charge strength (e.g. strongly anionic from weakly anionic).
The basis of ion-exchange chromatography is that charged ions
can freely exchange with ions of the same type. In this context,
the mass of the ion is irrelevant. Therefore, it is possible for
a bulky anion like a negatively charged protein to exchange with
chloride ions. This process can later be reversed by washing with
chloride ions in the form of a NaCl of KCl solution. Such washing
removes weakly bound proteins first, followed by more strongly
bound proteins with greater net negative charge.
Like most column chromatography techniques, ion exchange chromatography
requires a stationary phase, which is usually composed of insoluble,
hydrated polymers, such as cellulose, dextran, and agarose.
The ion-exchange groups are immobilized on this stationary
phase. Some of the anion exchangers are quaternary ammonium, quaternary
aminoethyl and diethylaminoethyl (DEAE). Some of the cation exchangers
are sulfopropyl, methyl sulfonate and carboxymethyl.
Practical requirements
- Buffers: Buffers used will depend on the characteristics
of the protein of interest. For proteins not previously purified
by DEAE-cellulose chromatography, buffer selection may be helped
if the pI of the protein of interest is known. In general, proteins
will bind to anion exchangers at pH values above their pIs, while
binding to cation exchangers, such as CM-cellulose, will occur
at pH values below their pIs. Phosphate, Tris, and other common
buffers are used in ion-exchange chromatography in concentrations
of 10-50mM.
- Chromatography: In general, approximately 70% of rat-liver
cytosolic proteins will bind to DEAE-cellulose at pH 7.5. If
the protein of interest has an alkaline pI, then passage through
such a column at this pH might be a useful first step in the
purification. Only highly acidic proteins will bind at pH 10.0.
The column is developed by applying a suitable salt gradient,
for example 0-100 mM NaCl in 10mM Tris buffer, pH 8.0. Fractions
are collected in a fraction collector and assayed for the protein
of interest, protein concentration, and conductivity. Although
shallower (e.g. 0-100, 300-400 mM) gradients generally give better
resolution, steeper gradients (e.g., 0-1 M) can be used in initial
experiments to identify elution positions of proteins of interest.
Ion Exchange Chromatography
Principle:
- Ion Exchange chromatography relies on the reversible exchange
of ions in solution with ions electrostatically bound to an insoluble
support media. There can be two types of functional groups covalently
attached to the support beads. These are called anion exchangers
(resin with positive functional groups) or cation exchangers
(resin with negative functional groups).
- Separation on ion exchange chromatography
columns is based on charge density. Start with exchange resin
with bound buffer counter ions (e.g. Cl-). The sample
proteins are then added to the column and the charge opposite
to the functional group are bound to exchanger, replacing buffer
counter ions; any neutral or like (positive) charged molecules
pass through without binding. The bound molecules are sequentially
eluted, often using increasing amounts of counter ions (e.g.
a gradient from 0.0- 0.4 M KCl). Proteins with fewer negative
charges eluted first (and replaced by gradient ions), followed
by proteins with greater quantity of negative charges.
Selecting the adequate ion exchanger
- Selection of ion exchanger depends on the charge of the protein
of interest. In the case of proteins, they have both negative
and positive charges, thus their net charge which depends upon
pH (can make protein more negative by raising pH or more positive
by lowering pH) dictates their binding to the ion exchanger.
When selecting the appropriate pH, the primary consideration
is the stability of the protein. If the protein is stable at
pHs above the isoelectric point, then use anionic (positive)
exchanger. If protein more stable below isoelectric point, chromatograph
on cation (negative) exchanger. If range of stability extends
1 pH unit above and below isoelectric point, either an anion
or cation exchanger can be used. If you do not know the isoelectric
point and thus the range of stability, mix known concentrations
of protein with small amount of cationinc and anionic resins
at different pHs. Determine amount bound by measuring concentration
in supernatant (protein assay). If you have a mixture of proteins,
you may have to perform some assay to determine where your protein
of interest is (bound or in supernatant)..
- Types of ion exchange resins. The supporting matrix determines
the flow properties, ion accessibility, chemical and mechanical
stability. Three groups generally used are (1) polystyrene, polyacrylic,
or polyphenolic resins, (2) cellulose resin, (3) dextran (Sephadex)
or Agarose (Serpharose). Functional groups can be strongly, intermediately
or weakly basic (anion (+)) or acidic (cation (-)) exchangers.
- Classified as weak or strong depending upon the range of
pH values over which it remains charged (strong ion exchangers
are charged over a wider pH range than weak exchangers). Weak
exchangers lose their charge below 6 (for cationic) or above
9 (for anionic) exchangers.
- Buffers used will depend on the characteristics of the protein
of interest. For proteins not previously purified by DEAE-cellulose
chromatography, buffer selection may be helped if the pI of the
protein of interest is known. In general, proteins will bind
to anion exchangers at pH values above their pIs, while binding
to cation exchangers, such as CM-cellulose, will occur at pH
values below their pIs. Phosphate, Tris, and other common buffers
are used in ion-exchange chromatography in concentrations of
10-50mM.
- Strongly basic anionic exchangers are quaternary aminoethyl
(QAE) QAE-Sephadex and quarternary ammonium (Bio-Rad AG
1, Dowex 1. A weakly basic anion exchanger is diethyaminoethyl
(DEAE), DEAE-Cellulose, DEAE-Sepharose.
- Strongly acidic cationic exchanger are those having sulfonic
groups such as Bio-Rad AG 50, Dowex 50. Weakly acidic cation
exchangers contain carboxyl groups such as carboxymethyl (CM-cellulose).
- The choice of using a strong vs weak cation or anion exchanger
depends on the pH of the molecule. A weakly acidic molecule which
requires very low or very high pH for ionization will require
the use of a strong ion exchanger because it functions at extremes
of pH. There are also stability considerations. If the substance
is stable to extremes of pH (eg. amino acids), strongly acidic
or basic ion exchangers can be used. If substance is labile (eg.
proteins) a weaker exchanger of low charge density is advisable
because the molecules can be eluted by more gentle conditions
of pH and ionic strength. For separation of molecules with high
charge from those with small charge it is best to use weak exchange
resins. If the charge differences between molecules is very small-weak
exchanger produces more resolution.
- Volume and shape of column. The amount of sample to be loaded
on the column recommended is 10-20% of the column capacity. Use
a short wide (fat) column . Long narrow columns often offer less
resolution, because the eluted ionic molecules may have to travel
long distances down column and may diffuse.
- Shape and size of gradient. A gradient of increasing ionic
strength can be used. Less often, a pH gradient is used. A continuous
or step gradient can be used. A continuous gradient will elute
symmetrical peaks and produce better resolution. A step gradient
may be useful if one has a few components with large differences
in elution (charge). Decreasing the slope of the gradient (increasing
the volume of the gradient) will lead to better resolution.
- In general, approximately 70% of rat-liver cytosolic proteins
will bind to DEAE-cellulose at pH 7.5. If the protein of interest
has an alkaline pI, then passage through such a column at this
pH might be a useful first step in the purification. Only highly
acidic proteins will bind at pH 10.0. The column is developed
by applying a suitable salt gradient, for example 0-100 mM NaCl
in 10mM Tris buffer, pH 8.0. Fractions are collected in a fraction
collector and assayed for the protein of interest, protein concentration,
and conductivity. Although shallower (e.g. 0-100, 300-400 mM)
gradients generally give better resolution, steeper gradients
(e.g., 0-1 M) can be used in initial experiments to identify
elution positions of proteins of interest.
Other properties of ion exchange resin
- The capacity of exchanger (molecules bound per unit weight
of exchanger) are affected by the porosity -- polystyrene, Sephadex,
Sepharose have functional groups on outside, and inside the beads
(porous), whereas cellulose has functinal groups only on surface.
The degree of cross-linking influences the capacity--high degree
of x-linking---> smaller pore size---> higher capacity
(more surface area)--good for separation of small molecules (eg.
amino acids, peptides, nucleotides). If using porous matrix with
larger molecules, chose matrix with larger pores (e.g. agarose-Sepharose)
- The mesh size (diameter of resin beads). The smaller beads--->
greater capacity---> slower flow rate (because beads packed
closer together)--> may get spreading of bands (less resolution).
Larger beads--may get better resolution by less capacity
Applications of ion exchangers
- Polystyrene and polyphenolic ion exchange resins (trade names
Dowex, Bio Rad AG, Bio Rex, Chelex) are more often used to separate
small such as amino acids (basis of amino acid analyzer), small
peptides, nucleotides, N-bases, cyclic nucleotides, organic acids
(e.g. intermediates of respiration). Large molecules do not penetrate
beads very well.
- The cellulose ion exchangers are commonly used for proteins,
including enzymes, polysaccharides and nucleic acids. DEAE-cellulose,
CM-cellulose and phosphocellulose are the most commonly used.
- Polydextran and agarose, e.g. DEAE-Sephadex, CM-Sephadex
are used to separate proteins, hormones, tRNAs, polysaccharides.
- Use of ion exchanger in conjunction with gel filtration.
In protein purification techniques both ion exchange and gel
filtration chromatography can be used. Ion exchange can be used
on rather crude homogenates and can be adopted for large capacity
separations. Afterwards, gel filtration chromatography can be
used for finer separation and molecular weight determination.
Affinity Chromatography
Principle:
- The separation is based on the biological function of the
molecule to be separated or purified rather than by size or charge
characteristics of the molecule. The ligand, a molecule complementary
to the one you want to isolate is immobilized on an insoluble
support (the "matrix").
- A mixture containing the desired molecule is run through
the column and the desired molecule binds
- specifically to the ligand, and the undesirable molecules
in the mixture, the ones which do not
- bind, are washed from the column. Then the molecule adsorbed
to the ligand is desorbed (eluted)
- by changing the conditions of binding
Coupling the ligand to the matrix
- The matrix is an insoluble support that should contain a
sufficient amounts of a suitable group to which the ligand can
be covalently linked. The matrix should be stable under conditions
of attachment, should be stable during binding of the macromolecule
and during elution of macromolecule. That is it should tolerate
extremes of pH, ionic strength and high concentration of denaturants
often used to elute the macromolecules. The matrix should have
low non-specific adsorption and should have good flow properties.
In some cases high porosity is desirable to increase binding
of the macromolecule.
- The matrices most commonly used are agarose (Sepharose 4B,
Bio Get A) and polyacrylamide; less often used are cellutlose
and polystyrene.
- The most generally used coupler for the ligand to matrix
is the cyanogen bromide-activated agarose (trade name CNBr-activiated
Sepharose 4B). The cyanogen bromide reacts with amino groups
of the ligand. Other media couple to ligands containing carboxyl,
amino, thiol, or hydroxyl groups.
- Some matrices have spacer arms--sequences extending from
the matrix--ligands bind to reactive groups at end of spacer
arm. Advantage of media with spacer arms: where ligand is small
and molecule to be bound is large, there may be steric hindrance
from the media--the ligand is partially buried within the media
support and may not be able to bind the molecule effectively.
With the spacer arm, the ligand is extended away from the media
so the desired molecule can bind to it.
- The ligand should have affinity for the molecule to be separated
in the range of 10-4 to 10-8 M in solution.
Interactions with dissociation (binding) constants greater than
10-4 M may be too weak to bind the molecule to the
ligand. If the dissociation constant is lower than 10-8
M (tight binding which takes small number of molecules for interaction),
then it may be difficult to elute the molecule of interest.
- Coupling procedure--exact procedure depends upon the properties
of the matrix and interactions of ligand and binding molecule.
In general: swell and wash gel, interact ligand with matrix (covalently
bound), block groups not bound to ligand and wash gel to remove
ligand not covatentty bound.
Affinity chromatography procedures
- Overall procedure: pack gel (matrix with ligand attached)
in suitable column. Apply sample--volume of sample not critical
if tight binding occurs. Weakly bound substances should be applied
in small volume (about 5% of bed volume) to give the desired
molecule(s) a chance to bind without being washed through the
column. Wash column with about 10 column volumes of the starting
buffer to remove non-bound substances.
- Molecules are bound to the ligand by various types of interactions
including hydrogen bonding, electrostatic, and hydrophobic interactions.
Therefore, for elution, one needs to use reagents that weaken
these interactions.
- There are two types of elution methods: (1) Non-selective
elution is often used with highly specific adsorbants. Change
in pH--usually a decrease in pH--alters the degree of ionization
of the charged groups. Change in ionic strength (higher or lower
salt concentration)--may use gradient elution. (2) Selective
elution--often used with group specific adsorbants and when binding
affinities are rather low it is best to use a molecule which
is complementary to the one to be eluted. The complementary molecule
will either compete with the desired molecule for binding to
the ligand, or will have a high affinity for the desired molecule,
bind, then "pull" off the desired molecule.
- You may use a batch procedure as a form of affinity chromatography.
Mix gel with molecules in a microcentrifuge tube. Invert the
tube over and over to allow desired molecule(s) to bind. Centrifuge
to pellet gel. Remove supernatant containing nonbound molecules.
Wash several times by adding buffer, interacting buffer with
gel, then recentrifuging and removing supernatant containing
more non-bound molecules; then elute with change in ionic strength,
pH, or selectively, with complementary molecule.
Applications
- Isolation of poly A containing messenger RNAs using oligo
dT cellulose.
- Lectins (carbohydrate binding proteins isolated from plant
seeds) can recognize glycoproteins and glycolipids. A column
can be made with the lectin Concanavalin A (Con A). Con A Sepharose
beads bind to specific types of glycoproteins. This type of molecules
can be eluted with sugars recognized by the particular lectin.
High Performance (Pressure)
Liquid Chromatography (HPLC)
www.chem.vt.edu/chem-ed/sep/lc/hplc.html
- Basic principle of HPLC: In theory, the resolution increases with increasing
length of column and of theoretical plates/unit length. If the
size of the matrix particles decreases, this increases surface
area increasing the number of theoretical plates. However, flow
rate drops as particle size decreases, and a slow flow rate leads
to more time for diffusion which leads to loss of resolution.
Therefore, one can reduce the diffusional spreading by reducing
the transit time of mobile phase by using high pressure. This
pressure forces liquid through the bed faster. Fine particles
and high pressure maintain high flow rate. The fine rigid particles
used are about 10µm in diameter. Stainless steel columns
20-50 cm length 1-4 mm diameter pressure up to 8000 psi. Columns
of 10-20 mm diameter are used for preparative higher capacity
columns, and are typically 50-200 psi. In general, two factors
to consider when selecting a column size are the efficiency and
sample-loading capacity. In the case of proteins, column length
contributes little to efficiency. In addition, longer columns
may have an adverse effect on protein recovery. The choice of
column diameter should be based on required sample capacity.
Columns of 1mm-2.1mm internal diameter are best suited to submicrogram
levels of material, thus minimizing sample loss and also increasing
sensitivity of detection. For analytical applications in the
microgram to low milligram range, columns of 4.6mm internal diameter
(analytical) are best.
- HPLC results in high resolution, that is,
sharp peaks. It also yields rapid separation (minutes to 1 hour).
Can be used with very small amounts of material (sample size
0.01 0.1 ml). HPLC can be analytical or preparative. HPLC can be used for all types of chromatography
discussed so far (size exclusion chromatography, ion exchange
chromatography, affinity chromatography). In addition, two other
types of separation developed for HPLC are reversed phase chromatography
and paired-ion chromatography.
- Reverse phase HPLC: In a normal
phase there is a polar solid support and an organic relatively
non-polar mobile phase solvent. Highly polar molecules are strongly
attracted to the stationary phase so they stick strongly and
are hard to elute (have long retention times and peak trailing).
Reversed phase uses non-polar stationary phase and polar mobile
phase. Reverse phase column chromatography uses matrix bound
non-polar hydrocarbon chains. The most common are n-alkyl-bonded
C4, C8 and C18. In general, C4 and C8 phases are preferable for
more hydrophobic samples and the C18 phase for hydrophilic samples.
If the proteins of interest are too strongly retained, a C4 column
can be used. The polar molecules now have higher affinity for
mobile phase and are eluted quickly. Reverse phase HPLC (RP-HPLC)
is good for polar biomolecules such as drugs and their metabolites,
peptides, vitamins, polyphenols, steroids. This technique is
used clinically to separate molecules in serum, urine, etc.
- Paired ion chromatography: Some highly polar compounds such as amino acids, organic
acids and catecholamines do not adhere at all to stationary phase
(non-polar). Therefore, the molecules are paired with their counterions
giving a less polar species which will initially stick to non
polar stationary phase but can still be eluted, apparently by
a type of ion-exchange mechanism. The ionization is suppressed
by chromatography at higher (or lower) pHs (depending upon charge).
Matrix for HPLC
- Column packing materials need to be of a
small uniform size and rigid (to withstand pressure flow). Theoretically,
column performance should increase with decreasing particle size.
Columns with particle sizes of 5-10µm show little difference
in performance. Columns with particle sizes of 2-3µm are
now available and can give much greater resolution. However,
any gain in column efficiency can be outweighed quickly by increased
column back-pressure, susceptibility to plugging, and shorter
column lifetime. Three types of matrix exist.
- Microporous supports. Micropores exist within particles 5-10µm in
diameter. The standard pore size for separation of small molecules
is 80 Angtrons but for the separation of proteins a pore size
of 300 Angstrons has become accepted as the norm. For proteins
>100Kda, pore sizes of >1000 Angstrons may be even better
(used in size exclusion chromatography).
- Pelicular support (superficially porous). Porous particles coated onto inert solid core such
as a glass bead about 40 µm in diameter. Stationary phase
supports often used are silica, alumina, polystyrene (used in
size exclusion chromatography).
- Bonded phase support.
Stationary phase chemically bonded to inert support (ion exchange,
affinity, reverse phase).
Sample injection.
- The sample is injected through syringe either
directly onto top of column or onto a small plug of inert material
above the column matrix either under pressure or the pressure
can be stopped and the sample loaded. The sample can also be
injected through a loop injector.
Thin layer Chromatography
- The paper is the stationary phase. A non-aqueous
solvent (mobile) phase is allowed to travel along the paper.
When the solvent reaches the solute, according to distribution
coefficient, a distribution between the 2 phases occurs. Essentially
the more soluble a solute is in the mobile phase, the further
the molecules will travel along the paper. You have probably
used this method to separate amino acids and plat pigments.
- Two dimentional (2-D) paper chromatography
can be used in "finger printing" where the analysis
of tryptic peptide digests are carried out in 2-D.
- Thin layer chromatography (TLC) is similar
to paper chromatography except that the stationary phase is a
layer of sorbent spread over a glass, foil or plastic surface.
The mobile phase is primarily by partitioning although adsorption
of the molecules to the stationary phase is also involved. The
adsorbents are very fine particles of silica, cellulose, etc.
The advantages of TLC over paper chromatography are the following:
(1) that you can separate very small amounts of material; (2)
TLC has greater solving power (better separation is due to very
fine particles that create a large surface area and due to the
high ratio of sorbent to solute; (3) wide choice of solvents;
(4) easy detection of spots; (5) Easy isolation of substance
separated (i.e. by scraping).
- 2-D TLC is similar to paper chromatography
in that two solvents are used for separation.
Gas Chromatography
Look at the following website: http://www.shu.ac.uk/schools/sci/chem/tutorials/chrom/gaschrm.htm
Quatination of Proteins:
Beer's law
http://www.shu.ac.uk/schools/sci/chem/tutorials/molspec/beers1.htm